SubtiBank SubtiBank
yobT [2018-11-07 15:41:29]
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yobT [2018-11-07 15:41:29]

unknown
locus
BSU19080
pI
8.92
mw
25.25 kDa
protein length
233 aa Sequence Blast
gene length
699 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,081,753 → 2,082,454

    The protein

    Protein family

  • metallo-beta-lactamase superfamily

    • Structure

  • [PDB|3ADR] (from Sulfolobus tokadaii, 25% identity) [pubmed|20544975]

    • Expression and Regulation

    Operons

    genes
    [gene|EDD0C5732E487A7F94684289F59B9130773316C1|yobT]-[gene|BB122C73972ACEA08DE97F95FC9AC249671C86A3|yobS]-[gene|6D9AAA63C4E43D2F80C7A2104BDF4D98A21C3B78|yobR]-[gene|6C67AD722D59671ED7589949690773732A8B845F|yobQ]-[gene|DA4A64BDF322EDE9EECE83AC9D4AAA01D3F16720|csaA]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A316 (yobT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/316 NBRP B. subtilis, Japan]
  • BKE19080 (Δ[gene|EDD0C5732E487A7F94684289F59B9130773316C1|yobT]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTTATTCCTCCTAA, downstream forward: _UP4_AAAGCAAAGAAAGGATGATG
  • BKK19080 (Δ[gene|EDD0C5732E487A7F94684289F59B9130773316C1|yobT]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTTATTCCTCCTAA, downstream forward: _UP4_AAAGCAAAGAAAGGATGATG

    • References

    Research papers

  • 20544975